MyBioCaddie My Data

About


For more details, see: github repo

The idea behind this project is to describe data in a lightweight fashion by adding YAML files to a github repo

Optionally, GitHub pages can be used to generate a web portal onto your data.

Instructions

First Fork this repo! (See Menu on top right)

You can optionally customize the _config.yml

Clear out the fake descriptors:

git rm _metadata/*md

Then add your own .md files in there, being sure to include the front matter. Be sure to include the magic biocaddie tag for indexing:

---
layout: dataset
title:  "My DataSet1"
date:   2015-05-20
categories: Exposome Phenotype Genotype
index: biocaddie
---

When done:

git commit -a
git push origin gh-pages

Then go to the URL:

https://yourusername.github.io/mybiocaddie/

For example:

cmungall.github.io/mybiocaddie/

Example sites

You can see the list of forks here:

mybiocaddie forks

Commenting on datasets

See this example

Aggregated sites

All mybiocaddie data is periodically harvested and aggregated here:

https://biodatasets.github.io/mybiocaddie-aggregator/

Python Client

TODO

Content